Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Gm23547-201ENSMUST00000158210 271 ntBASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc3Q8CCH2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Gm11780-201ENSMUST00000136880 516 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Gm43767-201ENSMUST00000198933 381 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nhlrc3Q8CCH2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nhlrc3Q8CCH2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nhlrc3Q8CCH2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nhlrc3Q8CCH2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.52□□□□□ -0.41
Nhlrc3Q8CCH2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nhlrc3Q8CCH2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nhlrc3Q8CCH2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.52□□□□□ -0.41
Nhlrc3Q8CCH2 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms