Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc46a2Q8CA03 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc46a2Q8CA03 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc46a2Q8CA03 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc46a2Q8CA03 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc46a2Q8CA03 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc46a2Q8CA03 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc46a2Q8CA03 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc46a2Q8CA03 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Gm27704-201ENSMUST00000185094 107 ntBASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc46a2Q8CA03 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Gm27742-201ENSMUST00000184667 60 ntBASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Gm27867-201ENSMUST00000184778 125 ntBASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc46a2Q8CA03 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms