Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gm23547-201ENSMUST00000158210 271 ntBASIC16.37■□□□□ 0.21
Trim9Q8C7M3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim9Q8C7M3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Gm27301-201ENSMUST00000184012 127 ntBASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim9Q8C7M3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Gm9385-201ENSMUST00000117563 472 ntBASIC16.35■□□□□ 0.21
Trim9Q8C7M3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim9Q8C7M3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trim9Q8C7M3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms