Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc30Q8BVF4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc30Q8BVF4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc30Q8BVF4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc30Q8BVF4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc30Q8BVF4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Gm6443-201ENSMUST00000203599 874 ntBASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc30Q8BVF4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc30Q8BVF4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc30Q8BVF4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc30Q8BVF4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc30Q8BVF4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc30Q8BVF4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Rpph1-201ENSMUST00000175096 319 ntBASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Gm20553-201ENSMUST00000204205 844 ntBASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc30Q8BVF4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gm15427-201ENSMUST00000117288 531 ntBASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc30Q8BVF4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc30Q8BVF4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc30Q8BVF4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc30Q8BVF4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc30Q8BVF4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms