Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.3■□□□□ 0.04
Suds3Q8BR65 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.29■□□□□ 0.04
Suds3Q8BR65 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Suds3Q8BR65 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.28■□□□□ 0.04
Suds3Q8BR65 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Suds3Q8BR65 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.27■□□□□ 0.04
Suds3Q8BR65 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Gm5682-201ENSMUST00000173402 505 ntBASIC15.27■□□□□ 0.04
Suds3Q8BR65 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.27■□□□□ 0.04
Suds3Q8BR65 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Suds3Q8BR65 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms