Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm9682-201ENSMUST00000197505 556 ntBASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4Q8BQZ5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Gm27300-201ENSMUST00000184085 97 ntBASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Gm27335-201ENSMUST00000184758 97 ntBASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4Q8BQZ5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Gm12260-201ENSMUST00000122447 411 ntBASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms