Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ckap4Q8BMK4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ckap4Q8BMK4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Gm17971-201ENSMUST00000190239 806 ntBASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ckap4Q8BMK4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Gm34391-201ENSMUST00000203706 907 ntBASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Rps4l-201ENSMUST00000071745 943 ntBASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ckap4Q8BMK4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ckap4Q8BMK4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms