Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Slc5a7Q8BGY9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc5a7Q8BGY9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Gm7889-201ENSMUST00000185591 958 ntBASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Gm9172-201ENSMUST00000212092 954 ntBASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc5a7Q8BGY9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Gm9484-201ENSMUST00000195892 1159 ntBASIC13□□□□□ -0.33
Slc5a7Q8BGY9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms