Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Npas4Q8BGD7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.57■□□□□ 0.08
Npas4Q8BGD7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Prob1-201ENSMUST00000097619 3021 ntBASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Npas4Q8BGD7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.56■□□□□ 0.08
Npas4Q8BGD7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Npas4Q8BGD7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Gm9229-201ENSMUST00000222777 126 ntBASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Npas4Q8BGD7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Npas4Q8BGD7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.54■□□□□ 0.08
Npas4Q8BGD7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Npas4Q8BGD7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms