Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Vrk1Q80X41 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.19□□□□□ -0.14
Vrk1Q80X41 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.19□□□□□ -0.14
Vrk1Q80X41 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm13223-201ENSMUST00000118609 747 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.18□□□□□ -0.14
Vrk1Q80X41 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk1Q80X41 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Sybu-209ENSMUST00000228639 4113 ntBASIC14.17□□□□□ -0.14
Vrk1Q80X41 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Gm8410-201ENSMUST00000117225 605 ntBASIC14.17□□□□□ -0.14
Vrk1Q80X41 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Gm17837-201ENSMUST00000186435 985 ntBASIC14.17□□□□□ -0.14
Vrk1Q80X41 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.17□□□□□ -0.14
Vrk1Q80X41 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.17□□□□□ -0.14
Vrk1Q80X41 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vrk1Q80X41 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vrk1Q80X41 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms