Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.14■□□□□ 0.33
Prpf40bQ80W14 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf40bQ80W14 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Gm6415-201ENSMUST00000118488 348 ntBASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Gm15693-201ENSMUST00000120470 637 ntBASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Mir7684-201ENSMUST00000183858 60 ntBASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Gm18187-201ENSMUST00000196476 984 ntBASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Prpf40bQ80W14 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Gm7730-201ENSMUST00000212486 454 ntBASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Prpf40bQ80W14 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf40bQ80W14 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms