Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Gm6415-201ENSMUST00000118488 348 ntBASIC13.72□□□□□ -0.21
Pif1Q80SX8 Gm15693-201ENSMUST00000120470 637 ntBASIC13.72□□□□□ -0.21
Pif1Q80SX8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.72□□□□□ -0.21
Pif1Q80SX8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pif1Q80SX8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pif1Q80SX8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.71□□□□□ -0.21
Pif1Q80SX8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Gm9824-201ENSMUST00000178707 561 ntBASIC13.71□□□□□ -0.21
Pif1Q80SX8 Gm27618-201ENSMUST00000183671 60 ntBASIC13.71□□□□□ -0.21
Pif1Q80SX8 Gm17837-201ENSMUST00000186435 985 ntBASIC13.71□□□□□ -0.21
Pif1Q80SX8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pif1Q80SX8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pif1Q80SX8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pif1Q80SX8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pif1Q80SX8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.71□□□□□ -0.22
Pif1Q80SX8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.7□□□□□ -0.22
Pif1Q80SX8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Pif1Q80SX8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pif1Q80SX8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms