Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Gm12134-201ENSMUST00000122109 520 ntBASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Gm9726-201ENSMUST00000180321 678 ntBASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm8Q6ZWM4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm8Q6ZWM4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lsm8Q6ZWM4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Gm2451-201ENSMUST00000199447 999 ntBASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Gm10290-201ENSMUST00000200451 999 ntBASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm8Q6ZWM4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm8Q6ZWM4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.52■□□□□ 0.07
Lsm8Q6ZWM4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms