Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Gm12585-201ENSMUST00000117307 290 ntBASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup98Q6PFD9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Gm10766-202ENSMUST00000194123 606 ntBASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Gm9797-201ENSMUST00000052902 613 ntBASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nup98Q6PFD9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nup98Q6PFD9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nup98Q6PFD9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nup98Q6PFD9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nup98Q6PFD9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.26■□□□□ 0.35
Nup98Q6PFD9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup98Q6PFD9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Gm45668-201ENSMUST00000211271 493 ntBASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.25■□□□□ 0.35
Nup98Q6PFD9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nup98Q6PFD9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms