Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Gm25857-201ENSMUST00000082788 129 ntBASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.12■□□□□ 0.65
Chd4Q6PDQ2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Gm6745-201ENSMUST00000199216 526 ntBASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chd4Q6PDQ2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 AC162801.1-201ENSMUST00000220612 198 ntBASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Gm11918-201ENSMUST00000121660 179 ntBASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd4Q6PDQ2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Gm14127-201ENSMUST00000117906 678 ntBASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Carlr-201ENSMUST00000181515 2574 ntBASIC19.09■□□□□ 0.65
Chd4Q6PDQ2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Gm15460-201ENSMUST00000118147 391 ntBASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Mir1894-201ENSMUST00000122802 81 ntBASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Chd4Q6PDQ2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms