Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Gm27618-201ENSMUST00000183671 60 ntBASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Gm27306-201ENSMUST00000183970 107 ntBASIC16.51■□□□□ 0.23
Trim37Q6PCX9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim37Q6PCX9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Gm9794-201ENSMUST00000202370 423 ntBASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim37Q6PCX9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.49■□□□□ 0.23
Trim37Q6PCX9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Gm17837-201ENSMUST00000186435 985 ntBASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Gm18057-201ENSMUST00000208220 503 ntBASIC16.49■□□□□ 0.23
Trim37Q6PCX9 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Gm25857-201ENSMUST00000082788 129 ntBASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim37Q6PCX9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim37Q6PCX9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms