Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scn9aQ62205 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Scn9aQ62205 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.22■□□□□ 0.35
Scn9aQ62205 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn9aQ62205 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.21■□□□□ 0.35
Scn9aQ62205 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.21■□□□□ 0.35
Scn9aQ62205 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn9aQ62205 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.21■□□□□ 0.35
Scn9aQ62205 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.21■□□□□ 0.35
Scn9aQ62205 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.21■□□□□ 0.35
Scn9aQ62205 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn9aQ62205 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.21■□□□□ 0.34
Scn9aQ62205 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scn9aQ62205 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn9aQ62205 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.2■□□□□ 0.34
Scn9aQ62205 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.2■□□□□ 0.34
Scn9aQ62205 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Gm15460-201ENSMUST00000118147 391 ntBASIC17.2■□□□□ 0.34
Scn9aQ62205 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Scn9aQ62205 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn9aQ62205 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.2■□□□□ 0.34
Scn9aQ62205 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 BC037039-201ENSMUST00000192003 2205 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Scn9aQ62205 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm8749-201ENSMUST00000117737 331 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scn9aQ62205 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scn9aQ62205 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm10275-202ENSMUST00000168697 495 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scn9aQ62205 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm45784-201ENSMUST00000188360 142 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm18307-201ENSMUST00000206864 949 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 Gm10275-201ENSMUST00000092620 635 ntBASIC17.19■□□□□ 0.34
Scn9aQ62205 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn9aQ62205 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn9aQ62205 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms