Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.1□□□□□ -0.31
Cd55bQ61476 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Gm45747-201ENSMUST00000212203 999 ntBASIC13.1□□□□□ -0.31
Cd55bQ61476 Thap2-203ENSMUST00000218989 527 ntBASIC13.1□□□□□ -0.31
Cd55bQ61476 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Cd55bQ61476 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd55bQ61476 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Gm14822-201ENSMUST00000122247 291 ntBASIC13.09□□□□□ -0.31
Cd55bQ61476 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.09□□□□□ -0.31
Cd55bQ61476 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd55bQ61476 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd55bQ61476 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.08□□□□□ -0.31
Cd55bQ61476 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Cd55bQ61476 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd55bQ61476 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd55bQ61476 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd55bQ61476 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd55bQ61476 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cd55bQ61476 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Cd55bQ61476 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cd55bQ61476 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cd55bQ61476 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.08□□□□□ -0.32
Cd55bQ61476 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Cd55bQ61476 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Gm25911-201ENSMUST00000157621 56 ntBASIC13.08□□□□□ -0.32
Cd55bQ61476 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cd55bQ61476 Gm27397-201ENSMUST00000184997 107 ntBASIC13.08□□□□□ -0.32
Cd55bQ61476 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.08□□□□□ -0.32
Cd55bQ61476 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cd55bQ61476 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms