Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.98□□□□□ -0.01
Six4Q61321 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.98□□□□□ -0.01
Six4Q61321 Gm11025-201ENSMUST00000140773 466 ntBASIC14.98□□□□□ -0.01
Six4Q61321 Gm45612-201ENSMUST00000211320 160 ntBASIC14.98□□□□□ -0.01
Six4Q61321 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Six4Q61321 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.98□□□□□ -0.01
Six4Q61321 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Six4Q61321 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.98□□□□□ -0.01
Six4Q61321 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.98□□□□□ -0.01
Six4Q61321 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six4Q61321 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.98□□□□□ -0.01
Six4Q61321 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Six4Q61321 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Six4Q61321 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.97□□□□□ -0.01
Six4Q61321 Gm14822-201ENSMUST00000122247 291 ntBASIC14.97□□□□□ -0.01
Six4Q61321 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.97□□□□□ -0.01
Six4Q61321 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Six4Q61321 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Six4Q61321 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six4Q61321 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Six4Q61321 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.96□□□□□ -0.01
Six4Q61321 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.96□□□□□ -0.01
Six4Q61321 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.96□□□□□ -0.01
Six4Q61321 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.96□□□□□ -0.01
Six4Q61321 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.96□□□□□ -0.01
Six4Q61321 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.96□□□□□ -0.01
Six4Q61321 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.96□□□□□ -0.01
Six4Q61321 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.96□□□□□ -0.01
Six4Q61321 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.96□□□□□ -0.01
Six4Q61321 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six4Q61321 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Six4Q61321 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Six4Q61321 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Six4Q61321 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Six4Q61321 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Six4Q61321 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Six4Q61321 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.95□□□□□ -0.02
Six4Q61321 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Six4Q61321 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Gm6973-201ENSMUST00000117080 721 ntBASIC14.95□□□□□ -0.02
Six4Q61321 Gm8749-201ENSMUST00000117737 331 ntBASIC14.95□□□□□ -0.02
Six4Q61321 Gm11745-201ENSMUST00000121669 448 ntBASIC14.95□□□□□ -0.02
Six4Q61321 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.95□□□□□ -0.02
Six4Q61321 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.95□□□□□ -0.02
Six4Q61321 Gm2451-201ENSMUST00000199447 999 ntBASIC14.95□□□□□ -0.02
Six4Q61321 Gm10290-201ENSMUST00000200451 999 ntBASIC14.95□□□□□ -0.02
Six4Q61321 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Six4Q61321 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms