Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Gm24543-201ENSMUST00000103867 82 ntBASIC17.03■□□□□ 0.32
Scnn1aQ61180 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.03■□□□□ 0.32
Scnn1aQ61180 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scnn1aQ61180 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Mir8102-201ENSMUST00000184148 139 ntBASIC17.02■□□□□ 0.32
Scnn1aQ61180 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Scnn1aQ61180 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scnn1aQ61180 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scnn1aQ61180 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scnn1aQ61180 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.02■□□□□ 0.31
Scnn1aQ61180 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scnn1aQ61180 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.02■□□□□ 0.31
Scnn1aQ61180 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scnn1aQ61180 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Gm6222-201ENSMUST00000120787 396 ntBASIC17.01■□□□□ 0.31
Scnn1aQ61180 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Mir7684-201ENSMUST00000183858 60 ntBASIC17.01■□□□□ 0.31
Scnn1aQ61180 Gm27989-201ENSMUST00000184721 107 ntBASIC17.01■□□□□ 0.31
Scnn1aQ61180 Gm44344-201ENSMUST00000200287 129 ntBASIC17.01■□□□□ 0.31
Scnn1aQ61180 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Gm9063-201ENSMUST00000223299 582 ntBASIC17.01■□□□□ 0.31
Scnn1aQ61180 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scnn1aQ61180 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Scnn1aQ61180 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17■□□□□ 0.31
Scnn1aQ61180 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Scnn1aQ61180 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17■□□□□ 0.31
Scnn1aQ61180 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17■□□□□ 0.31
Scnn1aQ61180 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17■□□□□ 0.31
Scnn1aQ61180 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scnn1aQ61180 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms