Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm27501-201ENSMUST00000183599 107 ntBASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm7287-201ENSMUST00000205267 602 ntBASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.44□□□□□ -0.1
Col12a1Q60847 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Col12a1Q60847 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.43□□□□□ -0.1
Col12a1Q60847 Gm6013-201ENSMUST00000212264 699 ntBASIC14.43□□□□□ -0.1
Col12a1Q60847 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col12a1Q60847 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.43□□□□□ -0.1
Col12a1Q60847 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Col12a1Q60847 Gm37230-201ENSMUST00000194491 818 ntBASIC14.42□□□□□ -0.1
Col12a1Q60847 Gm40466-201ENSMUST00000212174 422 ntBASIC14.42□□□□□ -0.1
Col12a1Q60847 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.42□□□□□ -0.1
Col12a1Q60847 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.42□□□□□ -0.1
Col12a1Q60847 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col12a1Q60847 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.42□□□□□ -0.1
Col12a1Q60847 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.42□□□□□ -0.1
Col12a1Q60847 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.42□□□□□ -0.1
Col12a1Q60847 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col12a1Q60847 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.41□□□□□ -0.1
Col12a1Q60847 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.41□□□□□ -0.1
Col12a1Q60847 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm22902-201ENSMUST00000158488 302 ntBASIC14.41□□□□□ -0.1
Col12a1Q60847 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms