Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.26□□□□□ -0.13
ClpbQ60649 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ClpbQ60649 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ClpbQ60649 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.26□□□□□ -0.13
ClpbQ60649 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.26□□□□□ -0.13
ClpbQ60649 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.26□□□□□ -0.13
ClpbQ60649 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.26□□□□□ -0.13
ClpbQ60649 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ClpbQ60649 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.26□□□□□ -0.13
ClpbQ60649 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ClpbQ60649 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.25□□□□□ -0.13
ClpbQ60649 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.25□□□□□ -0.13
ClpbQ60649 Gm2756-201ENSMUST00000195851 400 ntBASIC14.25□□□□□ -0.13
ClpbQ60649 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.25□□□□□ -0.13
ClpbQ60649 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ClpbQ60649 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClpbQ60649 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.25□□□□□ -0.13
ClpbQ60649 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.24□□□□□ -0.13
ClpbQ60649 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Gm17271-201ENSMUST00000165535 355 ntBASIC14.24□□□□□ -0.13
ClpbQ60649 Gm6736-201ENSMUST00000166583 948 ntBASIC14.24□□□□□ -0.13
ClpbQ60649 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.24□□□□□ -0.13
ClpbQ60649 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.24□□□□□ -0.13
ClpbQ60649 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.24□□□□□ -0.13
ClpbQ60649 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClpbQ60649 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms