Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav6-2Q5R1I4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Prob1-201ENSMUST00000097619 3021 ntBASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trav6-2Q5R1I4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm24543-201ENSMUST00000103867 82 ntBASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm13823-201ENSMUST00000119930 345 ntBASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm9719-201ENSMUST00000162765 543 ntBASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm27533-201ENSMUST00000183800 152 ntBASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm45098-201ENSMUST00000207179 657 ntBASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-2Q5R1I4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Gm5566-201ENSMUST00000116118 459 ntBASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-2Q5R1I4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms