Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-4Q5R1I0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Gm18737-201ENSMUST00000173594 937 ntBASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-4Q5R1I0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-4Q5R1I0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-4Q5R1I0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms