Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf20Q5DTM8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Gm14140-201ENSMUST00000119999 995 ntBASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf20Q5DTM8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf20Q5DTM8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Gm13597-201ENSMUST00000121239 375 ntBASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Psmb5-202ENSMUST00000227257 622 ntBASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf20Q5DTM8 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.64■□□□□ 0.42
Rnf20Q5DTM8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf20Q5DTM8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf20Q5DTM8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms