Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Urb1Q571H0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Urb1Q571H0 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.68□□□□□ -0.22
Urb1Q571H0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Urb1Q571H0 Gm22189-201ENSMUST00000103822 86 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Gm24694-201ENSMUST00000180054 110 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Mir7085-201ENSMUST00000184353 66 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Gm27663-201ENSMUST00000184839 110 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Gm44344-201ENSMUST00000200287 129 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.67□□□□□ -0.22
Urb1Q571H0 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.67□□□□□ -0.22
Urb1Q571H0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Urb1Q571H0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Urb1Q571H0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.66□□□□□ -0.22
Urb1Q571H0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Gm44719-201ENSMUST00000206404 149 ntBASIC13.66□□□□□ -0.22
Urb1Q571H0 Shd-206ENSMUST00000225145 998 ntBASIC13.66□□□□□ -0.22
Urb1Q571H0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Gm12138-201ENSMUST00000122180 951 ntBASIC13.66□□□□□ -0.22
Urb1Q571H0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Urb1Q571H0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Urb1Q571H0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Urb1Q571H0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Urb1Q571H0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Urb1Q571H0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Urb1Q571H0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Urb1Q571H0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.65□□□□□ -0.22
Urb1Q571H0 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.65□□□□□ -0.22
Urb1Q571H0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Urb1Q571H0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.65□□□□□ -0.22
Urb1Q571H0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms