Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rc3h1Q4VGL6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rc3h1Q4VGL6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Gm13223-201ENSMUST00000118609 747 ntBASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rc3h1Q4VGL6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Gm18766-201ENSMUST00000189811 808 ntBASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rc3h1Q4VGL6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Gm27622-201ENSMUST00000183779 60 ntBASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Gm18049-201ENSMUST00000208909 581 ntBASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rc3h1Q4VGL6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.11■□□□□ 0.33
Rc3h1Q4VGL6 Gm2451-201ENSMUST00000199447 999 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms