Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 BC037039-201ENSMUST00000192003 2205 ntBASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm15198-201ENSMUST00000117283 177 ntBASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm15240-201ENSMUST00000118156 720 ntBASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm15376-201ENSMUST00000122258 783 ntBASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm10478-201ENSMUST00000084451 396 ntBASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shank3Q4ACU6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Gm37424-201ENSMUST00000191727 561 ntBASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Gm44799-201ENSMUST00000207639 1202 ntBASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Shank3Q4ACU6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Shank3Q4ACU6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Shank3Q4ACU6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shank3Q4ACU6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shank3Q4ACU6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shank3Q4ACU6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shank3Q4ACU6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Gm42693-201ENSMUST00000196779 631 ntBASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Gm7619-201ENSMUST00000210649 1282 ntBASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Shank3Q4ACU6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank3Q4ACU6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms