Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Gm44357-201ENSMUST00000195897 142 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm19658-201ENSMUST00000196231 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44367-201ENSMUST00000196836 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44350-201ENSMUST00000197197 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44390-201ENSMUST00000197533 144 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44313-201ENSMUST00000198018 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44486-201ENSMUST00000198508 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44454-201ENSMUST00000198541 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44314-201ENSMUST00000199263 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44394-201ENSMUST00000199558 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44484-201ENSMUST00000199873 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44466-201ENSMUST00000200264 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm44359-201ENSMUST00000200671 138 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Carlr-201ENSMUST00000181515 2574 ntBASIC15.69■□□□□ 0.1
Nr1d1Q3UV55 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1d1Q3UV55 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1d1Q3UV55 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.66■□□□□ 0.1
Nr1d1Q3UV55 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms