Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf223Q3UV31 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Gm5479-201ENSMUST00000160578 435 ntBASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf223Q3UV31 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Rnf223Q3UV31 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Sybu-209ENSMUST00000228639 4113 ntBASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Gm27430-201ENSMUST00000184585 107 ntBASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Gm44333-201ENSMUST00000197168 107 ntBASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf223Q3UV31 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm6415-201ENSMUST00000118488 348 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm21156-201ENSMUST00000189693 869 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm29541-201ENSMUST00000191351 678 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm2451-201ENSMUST00000199447 999 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm10290-201ENSMUST00000200451 999 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf223Q3UV31 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms