Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Gm5177-201ENSMUST00000183092 997 ntBASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Gm10154-201ENSMUST00000084445 354 ntBASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdkl5Q3UTQ8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Gm5364-201ENSMUST00000216789 889 ntBASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl5Q3UTQ8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Gm9727-201ENSMUST00000161387 555 ntBASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl5Q3UTQ8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 Gm16198-201ENSMUST00000118766 670 ntBASIC17.16■□□□□ 0.34
Cdkl5Q3UTQ8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms