Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam196aQ3USH1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Gm13226-201ENSMUST00000117838 404 ntBASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Gm12341-201ENSMUST00000119724 503 ntBASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Gm5354-201ENSMUST00000182417 973 ntBASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.84□□□□□ -0.03
Fam196aQ3USH1 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam196aQ3USH1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam196aQ3USH1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam196aQ3USH1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam196aQ3USH1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam196aQ3USH1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Snora78-201ENSMUST00000158630 128 ntBASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam196aQ3USH1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Gm17794-201ENSMUST00000220252 955 ntBASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam196aQ3USH1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Fam196aQ3USH1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fam196aQ3USH1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fam196aQ3USH1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fam196aQ3USH1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms