Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Gm11918-201ENSMUST00000121660 179 ntBASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Arhgef40Q3UPH7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Gm12585-201ENSMUST00000117307 290 ntBASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Arhgef40Q3UPH7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Arhgef40Q3UPH7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 AC165157.4-201ENSMUST00000220587 139 ntBASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Gm16011-201ENSMUST00000121567 2662 ntBASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Arhgef40Q3UPH7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Arhgef40Q3UPH7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Arhgef40Q3UPH7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Arhgef40Q3UPH7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 AC166349.1-201ENSMUST00000220866 695 ntBASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Arhgef40Q3UPH7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Arhgef40Q3UPH7 Gm12341-201ENSMUST00000119724 503 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms