Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lins1Q3U1D0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
Lins1Q3U1D0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lins1Q3U1D0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.64■□□□□ 0.42
Lins1Q3U1D0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.64■□□□□ 0.42
Lins1Q3U1D0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lins1Q3U1D0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lins1Q3U1D0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Gm27306-201ENSMUST00000183970 107 ntBASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lins1Q3U1D0 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Gm27920-201ENSMUST00000183953 96 ntBASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lins1Q3U1D0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Gm13015-201ENSMUST00000118674 204 ntBASIC17.61■□□□□ 0.41
Lins1Q3U1D0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.61■□□□□ 0.41
Lins1Q3U1D0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms