Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc4Q3TCX3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.15□□□□□ -0.14
Khdc4Q3TCX3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Khdc4Q3TCX3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc4Q3TCX3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.15□□□□□ -0.14
Khdc4Q3TCX3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Khdc4Q3TCX3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Khdc4Q3TCX3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.15□□□□□ -0.15
Khdc4Q3TCX3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
Khdc4Q3TCX3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Thap2-203ENSMUST00000218989 527 ntBASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Khdc4Q3TCX3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.13□□□□□ -0.15
Khdc4Q3TCX3 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Gm13616-201ENSMUST00000120600 222 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Gm11745-201ENSMUST00000121669 448 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Khdc4Q3TCX3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms