Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ptchd3Q0EEE2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ptchd3Q0EEE2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Gm12497-201ENSMUST00000138778 237 ntBASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ptchd3Q0EEE2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptchd3Q0EEE2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms