Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sox4Q06831 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Sox4Q06831 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox4Q06831 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.6□□□□□ -0.07
Sox4Q06831 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox4Q06831 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox4Q06831 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.59□□□□□ -0.07
Sox4Q06831 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox4Q06831 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox4Q06831 Gm13365-201ENSMUST00000121188 973 ntBASIC14.59□□□□□ -0.07
Sox4Q06831 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox4Q06831 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox4Q06831 Chchd1-203ENSMUST00000224633 557 ntBASIC14.59□□□□□ -0.07
Sox4Q06831 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sox4Q06831 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sox4Q06831 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Sox4Q06831 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.59□□□□□ -0.07
Sox4Q06831 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox4Q06831 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Sox4Q06831 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox4Q06831 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.58□□□□□ -0.07
Sox4Q06831 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox4Q06831 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox4Q06831 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.58□□□□□ -0.07
Sox4Q06831 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox4Q06831 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sox4Q06831 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sox4Q06831 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Sox4Q06831 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Sox4Q06831 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.58□□□□□ -0.08
Sox4Q06831 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.58□□□□□ -0.08
Sox4Q06831 Gm15483-201ENSMUST00000120338 456 ntBASIC14.58□□□□□ -0.08
Sox4Q06831 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.58□□□□□ -0.08
Sox4Q06831 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.58□□□□□ -0.08
Sox4Q06831 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sox4Q06831 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sox4Q06831 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Sox4Q06831 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Sox4Q06831 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox4Q06831 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Sox4Q06831 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Sox4Q06831 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox4Q06831 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms