Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col9a1Q05722 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a1Q05722 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.5□□□□□ -0.09
Col9a1Q05722 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col9a1Q05722 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a1Q05722 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm19309-201ENSMUST00000218295 205 ntBASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col9a1Q05722 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.5□□□□□ -0.09
Col9a1Q05722 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a1Q05722 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.49□□□□□ -0.09
Col9a1Q05722 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col9a1Q05722 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.49□□□□□ -0.09
Col9a1Q05722 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Gm29747-201ENSMUST00000194764 585 ntBASIC14.49□□□□□ -0.09
Col9a1Q05722 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col9a1Q05722 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.49□□□□□ -0.09
Col9a1Q05722 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.49□□□□□ -0.09
Col9a1Q05722 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.49□□□□□ -0.09
Col9a1Q05722 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Gm44863-201ENSMUST00000207613 1422 ntBASIC14.49□□□□□ -0.09
Col9a1Q05722 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a1Q05722 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.48□□□□□ -0.09
Col9a1Q05722 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.48□□□□□ -0.09
Col9a1Q05722 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col9a1Q05722 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms