Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim43cP86449 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trim43cP86449 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Gm15467-201ENSMUST00000120582 445 ntBASIC16.13■□□□□ 0.17
Trim43cP86449 Gm12260-201ENSMUST00000122447 411 ntBASIC16.13■□□□□ 0.17
Trim43cP86449 Mir3113-201ENSMUST00000175478 76 ntBASIC16.13■□□□□ 0.17
Trim43cP86449 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim43cP86449 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim43cP86449 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
Trim43cP86449 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43cP86449 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Trim43cP86449 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim43cP86449 Gm15427-201ENSMUST00000117288 531 ntBASIC16.12■□□□□ 0.17
Trim43cP86449 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.12■□□□□ 0.17
Trim43cP86449 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.12■□□□□ 0.17
Trim43cP86449 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim43cP86449 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trim43cP86449 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trim43cP86449 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.12■□□□□ 0.17
Trim43cP86449 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim43cP86449 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim43cP86449 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim43cP86449 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.12■□□□□ 0.17
Trim43cP86449 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43cP86449 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43cP86449 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim43cP86449 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim43cP86449 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trim43cP86449 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim43cP86449 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim43cP86449 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43cP86449 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.11■□□□□ 0.17
Trim43cP86449 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim43cP86449 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim43cP86449 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.11■□□□□ 0.17
Trim43cP86449 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms