Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.55□□□□□ -0.56
Pfn1P62962 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.55□□□□□ -0.56
Pfn1P62962 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pfn1P62962 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pfn1P62962 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfn1P62962 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.54□□□□□ -0.56
Pfn1P62962 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.54□□□□□ -0.56
Pfn1P62962 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfn1P62962 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfn1P62962 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfn1P62962 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm9987-201ENSMUST00000069768 567 ntBASIC11.54□□□□□ -0.56
Pfn1P62962 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pfn1P62962 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Pfn1P62962 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.54□□□□□ -0.56
Pfn1P62962 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Pfn1P62962 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfn1P62962 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pfn1P62962 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfn1P62962 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pfn1P62962 Gm22697-201ENSMUST00000175194 63 ntBASIC11.53□□□□□ -0.56
Pfn1P62962 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.53□□□□□ -0.56
Pfn1P62962 Gm18101-201ENSMUST00000215769 548 ntBASIC11.53□□□□□ -0.56
Pfn1P62962 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pfn1P62962 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pfn1P62962 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Pfn1P62962 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.53□□□□□ -0.56
Pfn1P62962 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.53□□□□□ -0.56
Pfn1P62962 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfn1P62962 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms