Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.56□□□□□ -0.24
Lsm3P62311 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.56□□□□□ -0.24
Lsm3P62311 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.56□□□□□ -0.24
Lsm3P62311 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Lsm3P62311 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.56□□□□□ -0.24
Lsm3P62311 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.55□□□□□ -0.24
Lsm3P62311 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm3P62311 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm3P62311 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.55□□□□□ -0.24
Lsm3P62311 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lsm3P62311 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.55□□□□□ -0.24
Lsm3P62311 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Lsm3P62311 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm3P62311 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm3P62311 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm3P62311 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm3P62311 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Lsm3P62311 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lsm3P62311 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Lsm3P62311 Gm26039-201ENSMUST00000158152 144 ntBASIC13.54□□□□□ -0.24
Lsm3P62311 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.54□□□□□ -0.24
Lsm3P62311 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.54□□□□□ -0.24
Lsm3P62311 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.54□□□□□ -0.24
Lsm3P62311 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm3P62311 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Lsm3P62311 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm3P62311 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm3P62311 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm3P62311 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm3P62311 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms