Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm10355-201ENSMUST00000097146 517 ntBASIC13.11□□□□□ -0.31
Sec61a1P61620 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sec61a1P61620 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a1P61620 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.1□□□□□ -0.31
Sec61a1P61620 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Gm18733-201ENSMUST00000173950 856 ntBASIC13.1□□□□□ -0.31
Sec61a1P61620 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.1□□□□□ -0.31
Sec61a1P61620 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.1□□□□□ -0.31
Sec61a1P61620 Gm9172-201ENSMUST00000212092 954 ntBASIC13.1□□□□□ -0.31
Sec61a1P61620 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a1P61620 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sec61a1P61620 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a1P61620 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sec61a1P61620 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.09□□□□□ -0.31
Sec61a1P61620 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.09□□□□□ -0.31
Sec61a1P61620 Gm2651-201ENSMUST00000203560 838 ntBASIC13.09□□□□□ -0.31
Sec61a1P61620 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.09□□□□□ -0.31
Sec61a1P61620 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Sec61a1P61620 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a1P61620 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sec61a1P61620 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.08□□□□□ -0.31
Sec61a1P61620 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.08□□□□□ -0.31
Sec61a1P61620 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sec61a1P61620 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sec61a1P61620 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.08□□□□□ -0.32
Sec61a1P61620 Gm25990-201ENSMUST00000102440 86 ntBASIC13.08□□□□□ -0.32
Sec61a1P61620 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Gm15173-201ENSMUST00000122049 433 ntBASIC13.08□□□□□ -0.32
Sec61a1P61620 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.08□□□□□ -0.32
Sec61a1P61620 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a1P61620 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a1P61620 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms