Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sf3b6P59708 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3b6P59708 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sf3b6P59708 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.19□□□□□ -0.3
Sf3b6P59708 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b6P59708 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.18□□□□□ -0.3
Sf3b6P59708 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sf3b6P59708 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.18□□□□□ -0.3
Sf3b6P59708 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.18□□□□□ -0.3
Sf3b6P59708 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3b6P59708 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3b6P59708 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Gm15358-201ENSMUST00000119249 520 ntBASIC13.17□□□□□ -0.3
Sf3b6P59708 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.17□□□□□ -0.3
Sf3b6P59708 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.17□□□□□ -0.3
Sf3b6P59708 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b6P59708 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms