Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdh11P55288 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdh11P55288 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh11P55288 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.55□□□□□ -0.24
Cdh11P55288 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cdh11P55288 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Gm7222-201ENSMUST00000117512 906 ntBASIC13.55□□□□□ -0.24
Cdh11P55288 Gm11780-201ENSMUST00000136880 516 ntBASIC13.55□□□□□ -0.24
Cdh11P55288 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.55□□□□□ -0.24
Cdh11P55288 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.55□□□□□ -0.24
Cdh11P55288 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Cdh11P55288 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdh11P55288 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.55□□□□□ -0.24
Cdh11P55288 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Cdh11P55288 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.55□□□□□ -0.24
Cdh11P55288 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cdh11P55288 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.55□□□□□ -0.24
Cdh11P55288 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdh11P55288 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.55□□□□□ -0.24
Cdh11P55288 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cdh11P55288 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.55□□□□□ -0.24
Cdh11P55288 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh11P55288 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdh11P55288 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh11P55288 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cdh11P55288 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.54□□□□□ -0.24
Cdh11P55288 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cdh11P55288 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 AV026068-213ENSMUST00000223675 1171 ntBASIC13.54□□□□□ -0.24
Cdh11P55288 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh11P55288 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh11P55288 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh11P55288 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh11P55288 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Cdh11P55288 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm8825-201ENSMUST00000182565 998 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm4518-201ENSMUST00000182638 718 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh11P55288 Gm27525-201ENSMUST00000184465 107 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.53□□□□□ -0.24
Cdh11P55288 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms