Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sox3P53784 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Sox3P53784 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sox3P53784 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.24□□□□□ -0.13
Sox3P53784 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.24□□□□□ -0.13
Sox3P53784 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.24□□□□□ -0.13
Sox3P53784 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm4518-201ENSMUST00000182638 718 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Gm7787-201ENSMUST00000216858 688 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.24□□□□□ -0.13
Sox3P53784 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sox3P53784 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox3P53784 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Sox3P53784 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Sox3P53784 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.23□□□□□ -0.13
Sox3P53784 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Sox3P53784 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox3P53784 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox3P53784 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox3P53784 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox3P53784 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sox3P53784 Gm27430-201ENSMUST00000184585 107 ntBASIC14.23□□□□□ -0.13
Sox3P53784 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Gm44333-201ENSMUST00000197168 107 ntBASIC14.23□□□□□ -0.13
Sox3P53784 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox3P53784 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox3P53784 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Sox3P53784 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sox3P53784 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox3P53784 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox3P53784 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox3P53784 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox3P53784 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox3P53784 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox3P53784 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox3P53784 Gm20553-201ENSMUST00000204205 844 ntBASIC14.22□□□□□ -0.13
Sox3P53784 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.22□□□□□ -0.13
Sox3P53784 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sox3P53784 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sox3P53784 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox3P53784 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms