Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.1■□□□□ 0.01
Sox1P53783 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.1■□□□□ 0.01
Sox1P53783 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.1■□□□□ 0.01
Sox1P53783 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sox1P53783 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sox1P53783 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox1P53783 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox1P53783 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox1P53783 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox1P53783 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox1P53783 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Gm5187-201ENSMUST00000117317 991 ntBASIC15.09■□□□□ 0.01
Sox1P53783 Gm13350-201ENSMUST00000120519 479 ntBASIC15.09■□□□□ 0.01
Sox1P53783 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Mir8109-201ENSMUST00000184375 117 ntBASIC15.09■□□□□ 0.01
Sox1P53783 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox1P53783 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.09■□□□□ 0.01
Sox1P53783 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.08■□□□□ 0.01
Sox1P53783 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox1P53783 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.08■□□□□ 0
Sox1P53783 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.08■□□□□ 0
Sox1P53783 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Sox1P53783 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Gm18054-201ENSMUST00000207539 555 ntBASIC15.08■□□□□ 0
Sox1P53783 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Gm7561-201ENSMUST00000211203 886 ntBASIC15.08■□□□□ 0
Sox1P53783 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.08■□□□□ 0
Sox1P53783 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.08■□□□□ 0
Sox1P53783 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.08■□□□□ 0
Sox1P53783 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sox1P53783 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox1P53783 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.08■□□□□ 0
Sox1P53783 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox1P53783 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox1P53783 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox1P53783 Mir7070-201ENSMUST00000183657 86 ntBASIC15.07■□□□□ 0
Sox1P53783 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.07■□□□□ 0
Sox1P53783 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.07■□□□□ 0
Sox1P53783 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Sox1P53783 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms