Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.32□□□□□ -0.12
Lbx1P52955 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lbx1P52955 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.31□□□□□ -0.12
Lbx1P52955 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.31□□□□□ -0.12
Lbx1P52955 Gm11628-201ENSMUST00000117568 171 ntBASIC14.31□□□□□ -0.12
Lbx1P52955 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.31□□□□□ -0.12
Lbx1P52955 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lbx1P52955 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Gm27847-201ENSMUST00000183711 107 ntBASIC14.31□□□□□ -0.12
Lbx1P52955 Gm27375-201ENSMUST00000183799 107 ntBASIC14.31□□□□□ -0.12
Lbx1P52955 Mir7654-201ENSMUST00000185082 70 ntBASIC14.31□□□□□ -0.12
Lbx1P52955 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.31□□□□□ -0.12
Lbx1P52955 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Lbx1P52955 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lbx1P52955 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lbx1P52955 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.31□□□□□ -0.12
Lbx1P52955 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Lbx1P52955 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lbx1P52955 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lbx1P52955 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.3□□□□□ -0.12
Lbx1P52955 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Gm23931-201ENSMUST00000103842 109 ntBASIC14.3□□□□□ -0.12
Lbx1P52955 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.3□□□□□ -0.12
Lbx1P52955 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.3□□□□□ -0.12
Lbx1P52955 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Lbx1P52955 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lbx1P52955 Gm9229-201ENSMUST00000222777 126 ntBASIC14.3□□□□□ -0.12
Lbx1P52955 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Lbx1P52955 Gm6091-201ENSMUST00000098307 165 ntBASIC14.3□□□□□ -0.12
Lbx1P52955 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lbx1P52955 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lbx1P52955 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.3□□□□□ -0.12
Lbx1P52955 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lbx1P52955 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lbx1P52955 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.29□□□□□ -0.12
Lbx1P52955 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.29□□□□□ -0.12
Lbx1P52955 Gm44364-201ENSMUST00000198368 141 ntBASIC14.29□□□□□ -0.12
Lbx1P52955 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.29□□□□□ -0.12
Lbx1P52955 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.29□□□□□ -0.12
Lbx1P52955 Gm7561-201ENSMUST00000211203 886 ntBASIC14.29□□□□□ -0.12
Lbx1P52955 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.29□□□□□ -0.12
Lbx1P52955 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Gm9823-201ENSMUST00000051212 327 ntBASIC14.29□□□□□ -0.12
Lbx1P52955 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lbx1P52955 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lbx1P52955 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.29□□□□□ -0.12
Lbx1P52955 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lbx1P52955 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms