Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 Gm8062-201ENSMUST00000139696 444 ntBASIC16.03■□□□□ 0.16
SqleP52019 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SqleP52019 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SqleP52019 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SqleP52019 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.03■□□□□ 0.16
SqleP52019 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SqleP52019 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SqleP52019 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.02■□□□□ 0.16
SqleP52019 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.02■□□□□ 0.16
SqleP52019 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SqleP52019 Mir1894-201ENSMUST00000122802 81 ntBASIC16.02■□□□□ 0.16
SqleP52019 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.02■□□□□ 0.16
SqleP52019 Snora78-201ENSMUST00000158630 128 ntBASIC16.02■□□□□ 0.16
SqleP52019 Gm6244-201ENSMUST00000178732 841 ntBASIC16.02■□□□□ 0.16
SqleP52019 Gm27839-201ENSMUST00000184242 106 ntBASIC16.02■□□□□ 0.16
SqleP52019 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.02■□□□□ 0.16
SqleP52019 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SqleP52019 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SqleP52019 Olfr582-201ENSMUST00000098212 960 ntBASIC16.02■□□□□ 0.16
SqleP52019 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SqleP52019 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SqleP52019 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
SqleP52019 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SqleP52019 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SqleP52019 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SqleP52019 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SqleP52019 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.01■□□□□ 0.15
SqleP52019 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SqleP52019 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Gm15198-201ENSMUST00000117283 177 ntBASIC16.01■□□□□ 0.15
SqleP52019 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.01■□□□□ 0.15
SqleP52019 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.01■□□□□ 0.15
SqleP52019 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.01■□□□□ 0.15
SqleP52019 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.01■□□□□ 0.15
SqleP52019 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SqleP52019 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SqleP52019 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SqleP52019 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
SqleP52019 Mir7654-201ENSMUST00000185082 70 ntBASIC16■□□□□ 0.15
SqleP52019 Gm45784-201ENSMUST00000188360 142 ntBASIC16■□□□□ 0.15
SqleP52019 Gm37424-201ENSMUST00000191727 561 ntBASIC16■□□□□ 0.15
SqleP52019 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Gm8399-201ENSMUST00000082300 1117 ntBASIC16■□□□□ 0.15
SqleP52019 Mir125a-201ENSMUST00000083545 68 ntBASIC16■□□□□ 0.15
SqleP52019 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
SqleP52019 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SqleP52019 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
SqleP52019 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
SqleP52019 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16■□□□□ 0.15
SqleP52019 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16■□□□□ 0.15
SqleP52019 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SqleP52019 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SqleP52019 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
SqleP52019 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SqleP52019 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SqleP52019 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SqleP52019 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SqleP52019 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms