Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TubP50586 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.23■□□□□ 0.03
TubP50586 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TubP50586 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.23■□□□□ 0.03
TubP50586 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Gm24513-201ENSMUST00000174964 138 ntBASIC15.23■□□□□ 0.03
TubP50586 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.23■□□□□ 0.03
TubP50586 Gm20553-201ENSMUST00000204205 844 ntBASIC15.23■□□□□ 0.03
TubP50586 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TubP50586 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TubP50586 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TubP50586 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.22■□□□□ 0.03
TubP50586 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TubP50586 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TubP50586 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TubP50586 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TubP50586 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.22■□□□□ 0.03
TubP50586 Gm14822-201ENSMUST00000122247 291 ntBASIC15.22■□□□□ 0.03
TubP50586 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.22■□□□□ 0.03
TubP50586 Gm27397-201ENSMUST00000184997 107 ntBASIC15.22■□□□□ 0.03
TubP50586 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TubP50586 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TubP50586 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TubP50586 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.21■□□□□ 0.03
TubP50586 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TubP50586 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.21■□□□□ 0.03
TubP50586 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TubP50586 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.21■□□□□ 0.03
TubP50586 Gm11025-201ENSMUST00000140773 466 ntBASIC15.21■□□□□ 0.03
TubP50586 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.21■□□□□ 0.03
TubP50586 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.21■□□□□ 0.03
TubP50586 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
TubP50586 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TubP50586 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TubP50586 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.21■□□□□ 0.03
TubP50586 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TubP50586 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TubP50586 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TubP50586 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TubP50586 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TubP50586 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TubP50586 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TubP50586 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TubP50586 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TubP50586 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TubP50586 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.2■□□□□ 0.02
TubP50586 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TubP50586 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TubP50586 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TubP50586 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TubP50586 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.2■□□□□ 0.02
TubP50586 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms