Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Mzt1-203ENSMUST00000227948 952 ntBASIC14.4□□□□□ -0.1
Hnf4aP49698 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hnf4aP49698 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.4□□□□□ -0.1
Hnf4aP49698 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hnf4aP49698 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hnf4aP49698 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hnf4aP49698 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hnf4aP49698 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.39□□□□□ -0.11
Hnf4aP49698 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.39□□□□□ -0.11
Hnf4aP49698 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.39□□□□□ -0.11
Hnf4aP49698 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.39□□□□□ -0.11
Hnf4aP49698 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hnf4aP49698 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hnf4aP49698 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hnf4aP49698 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.39□□□□□ -0.11
Hnf4aP49698 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.39□□□□□ -0.11
Hnf4aP49698 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hnf4aP49698 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.38□□□□□ -0.11
Hnf4aP49698 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.38□□□□□ -0.11
Hnf4aP49698 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.38□□□□□ -0.11
Hnf4aP49698 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hnf4aP49698 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hnf4aP49698 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Hnf4aP49698 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hnf4aP49698 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms